STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02414.1ABC transporter permease. (327 aa)    
Predicted Functional Partners:
EFL02415.1
Extracellular solute-binding protein.
 
  0.986
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.972
EFL02413.1
ABC transporter permease.
 
0.938
EFK98242.1
Sugar transport membrane protein.
 
  0.904
EFK98342.1
ABC-type sugar transport system.
  0.904
EFL04129.1
Sugar transport integral membrane protein.
  0.904
EFK98197.1
ABC transporter permease.
  0.903
EFL03440.1
ABC transporter permease.
  0.903
EFL03225.1
ABC transporter permease.
 
  0.902
EFL03277.1
Transport system membrane protein.
  0.902
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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