Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02415.1Extracellular solute-binding protein. (347 aa)    
Predicted Functional Partners:
EFL02414.1
ABC transporter permease.
 
  0.985
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.978
EFL02413.1
ABC transporter permease.
 
  0.972
EFL03224.1
ABC transporter permease.
 
  0.883
EFK99088.1
Maltose/trehalose porter.
  
  
 
0.882
EFK99138.1
Sugar transporter sugar binding protein.
  
  
 
0.876
EFL03931.1
Sugar transporter sugar binding protein.
  
  
 
0.876
EFL02561.1
Sugar transporter sugar binding protein.
  
  
 
0.874
EFL03748.1
Sugar-binding periplasmic protein.
  
  
 
0.873
EFK98341.1
ABC transporter.
 
 0.871
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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