STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02415.1Extracellular solute-binding protein. (347 aa)    
Predicted Functional Partners:
EFL02414.1
ABC transporter permease.
 
  0.986
EFL02413.1
ABC transporter permease.
 
  0.968
EFL03224.1
ABC transporter permease.
 
 0.884
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.875
EFK98341.1
ABC transporter.
 
  0.870
EFL03749.1
ABC-type sugar transport system.
 
  0.845
EFK98342.1
ABC-type sugar transport system.
  
  0.830
EFL04130.1
Cellobiose transport permease.
 
  0.822
EFL03103.1
Integral membrane binding protein dependent transporter; Overlaps another CDS with the same product name.
  
  0.804
EFL03104.1
Integral membrane binding protein dependent transporter; Overlaps another CDS with the same product name.
 
 0.801
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.