STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02428.1Pyrimidine utilization protein B. (184 aa)    
Predicted Functional Partners:
EFL02427.1
Transcriptional regulator.
 
     0.675
EFL03583.1
Transmembrane protein.
 
     0.634
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
 0.623
EFL01878.1
Major facilitator superfamily transporter multidrug resistance protein.
     0.557
EFL03503.1
N-carbamoylputrescine amidase.
   
 
 0.532
EFL03504.1
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.521
EFL01733.1
L-aspartate oxidase.
   
 0.516
EFL03252.1
Major facilitator superfamily transporter multidrug resistance protein.
     0.493
EFK98347.1
SMP-30/gluconolaconase/LRE domain-containing protein.
   
 
  0.469
EFL00321.1
YjeF family protein.
   
    0.469
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.