Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02430.1Lipoprotein. (785 aa)    
Predicted Functional Partners:
EFK98284.1
Peptide/opine/nickel uptake family ABC transporter.
  
 0.898
EFK99445.1
D-methionine ABC transporter, ATP-binding protein; Unextendable partial coding region.
   
  0.887
EFL01344.1
Oligopeptide/dipeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.873
EFL01415.1
ABC transporter membrane protein.
  
  
  0.870
EFK98834.1
Lipoprotein oligopeptide binding protein.
  
  
  0.869
EFK99821.1
Sugar ABC transporter solute-binding protein.
  
  
  0.869
EFL02946.1
Peptide transport system secreted peptide binding protein.
  
  
  0.869
EFL01346.1
Peptide ABC transporter permease.
 
  0.868
EFL02432.1
Transport system protein.
  
 
 0.857
EFL02437.1
Peptide transport system secreted peptide-binding protein.
  
 
 0.857
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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