STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02433.1Nickel ABC transporter, permease subunit NikB. (309 aa)    
Predicted Functional Partners:
EFL02434.1
Nickel ABC transporter, permease subunit NikC.
 
  0.981
EFL02436.1
Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.
 
 0.980
EFL02435.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.972
EFL02432.1
Transport system protein.
 
 
  0.953
EFL02437.1
Peptide transport system secreted peptide-binding protein.
 
 
  0.944
EFL02439.1
Nickel ABC transporter, permease subunit NikC.
 
  0.942
EFK98284.1
Peptide/opine/nickel uptake family ABC transporter.
 
 
 0.933
EFL03731.1
Nickel ABC transporter, permease subunit NikC.
 
  0.922
EFL02440.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.919
EFL02441.1
Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.
 
  0.918
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.