Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02439.1Nickel ABC transporter, permease subunit NikC. (337 aa)    
Predicted Functional Partners:
EFL02438.1
Nickel ABC transporter, permease subunit NikB.
 
  0.985
EFL02440.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.981
EFL02441.1
Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.
  0.981
EFL02436.1
Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.
 0.971
EFL02433.1
Nickel ABC transporter, permease subunit NikB.
 
  0.954
EFL03730.1
Nickel ABC transporter, permease subunit NikB.
 
  0.952
EFL02435.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.945
EFL02437.1
Peptide transport system secreted peptide-binding protein.
 
 
 0.944
EFK98122.1
Nickel ABC transporter, permease subunit NikB.
 
  0.937
EFL03732.1
D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.924
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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