Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EFL02440.1D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (326 aa)    
Predicted Functional Partners:
EFL02439.1
Nickel ABC transporter, permease subunit NikC.
  0.981
EFL02438.1
Nickel ABC transporter, permease subunit NikB.
 
  0.974
EFL03955.1
Nickel ABC transporter, permease subunit NikC.
 0.949
EFL02441.1
Nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily.
 
 
0.948
EFL02434.1
Nickel ABC transporter, permease subunit NikC.
  0.938
EFK98539.1
Nickel ABC transporter, permease subunit NikC.
  0.934
EFL02753.1
Nickel ABC transporter, permease subunit NikC.
 0.925
EFL02433.1
Nickel ABC transporter, permease subunit NikB.
 
  0.924
EFL03730.1
Nickel ABC transporter, permease subunit NikB.
 
  0.922
EFL02944.1
Nickel ABC transporter, permease subunit NikC.
  0.916
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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