Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL02454.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (137 aa)    
Predicted Functional Partners:
EFL01956.1
Oxidoreductase.
  
 0.999
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 0.985
EFK99134.1
Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.975
EFL01955.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.968
EFK99171.1
Glutamate synthase(NADPH) large subunit.
    
 0.954
EFL02705.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 0.948
EFK99170.1
Glutamate synthase (NADPH), homotetrameric; Unextendable partial coding region.
  
 0.943
EFL02455.1
Succinyldiaminopimelate transaminase.
   
  0.920
EFL02609.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
  
 0.912
EFK99987.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.901
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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