Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02465.1Conserved hypothetical protein. (670 aa)    
Predicted Functional Partners:
EFL02517.1
ATP-dependent DNA helicase PcrA.
  
 0.988
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.922
EFL01919.1
ATP-dependent DNA helicase RecQ.
   
 0.895
EFL03026.1
ATP-dependent DNA helicase.
   
 0.895
EFL03466.1
ATP-dependent DNA helicase RecQ.
   
 0.895
EFL01226.1
DNA polymerase III beta subunit domain-containing protein; Unextendable partial coding region.
   
 0.894
EFL01228.1
DNA polymerase III beta subunit domain-containing protein.
   
 0.894
EFK98800.1
5'-3' exonuclease.
   
 0.875
EFL00267.1
ATP-dependent DNA helicase PcrA.
   
 0.857
EFL02511.1
Helicase; Unextendable partial coding region.
   
 0.857
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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