Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02470.1Conserved hypothetical protein. (55 aa)    
Predicted Functional Partners:
EFL02469.1
2-ketocyclohexanecarboxyl-CoA hydrolase; Unextendable partial coding region; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.663
EFL01567.1
Septum site determining protein.
  
     0.580
EFK98963.1
Tetratricopeptide TPR_4.
  
     0.558
EFL01417.1
Conserved hypothetical protein.
  
     0.461
EFL01740.1
Lsr2.
  
     0.453
EFK98144.1
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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