Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02481.1Conserved hypothetical protein. (176 aa)    
Predicted Functional Partners:
EFL02482.1
Magnesium and cobalt transporter CorA.
       0.798
EFL02826.1
Conserved hypothetical protein.
  
     0.771
EFL01159.1
Integral membrane protein.
  
     0.690
EFL01161.1
Integral membrane protein.
  
     0.665
EFL00310.1
Conserved hypothetical protein.
  
     0.638
EFL00050.1
Secreted protein.
  
     0.608
EFL01308.1
Conserved hypothetical protein.
  
     0.593
EFL00052.1
Conserved hypothetical protein.
  
     0.577
EFL00051.1
Conserved hypothetical protein.
  
     0.575
EFL02592.1
Conserved hypothetical protein.
  
     0.532
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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