Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EFL02499.1ABC transporter solute-binding protein. (589 aa)    
Predicted Functional Partners:
EFL02501.1
Nickel ABC transporter, permease subunit NikB.
 
 0.930
EFL02500.1
Nickel ABC transporter, permease subunit NikC.
 
 0.929
EFK98284.1
Peptide/opine/nickel uptake family ABC transporter.
  
 0.906
EFK99445.1
D-methionine ABC transporter, ATP-binding protein; Unextendable partial coding region.
  
  0.901
EFK98541.1
Peptide-binding transporter.
  
  
  0.878
EFK98834.1
Lipoprotein oligopeptide binding protein.
  
  
 
0.872
EFK98835.1
Lipoprotein oligopeptide binding protein.
  
  
 
0.872
EFL01347.1
Extracellular solute-binding dependent transport lipoprotein.
  
  
  0.871
EFL03139.1
Peptide ABC transporter membrane protein.
  
  
 
0.868
EFL02755.1
Nickel ABC transporter, permease subunit NikB.
 
 0.856
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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