STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02501.1Nickel ABC transporter, permease subunit NikB. (329 aa)    
Predicted Functional Partners:
EFL02500.1
Nickel ABC transporter, permease subunit NikC.
 
 0.977
EFL02499.1
ABC transporter solute-binding protein.
 
 0.943
EFL02502.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.941
EFK98284.1
Peptide/opine/nickel uptake family ABC transporter.
 
 
 0.931
EFL02753.1
Nickel ABC transporter, permease subunit NikC.
 
 0.902
EFL03955.1
Nickel ABC transporter, permease subunit NikC.
 
 0.902
EFK98539.1
Nickel ABC transporter, permease subunit NikC.
 
 0.880
EFK98121.1
Oligopeptide ABC transporter integral membrane protein.
 
 
 0.878
EFL02944.1
Nickel ABC transporter, permease subunit NikC.
 
 0.876
EFL01345.1
Nickel ABC transporter, permease subunit NikC.
 
 0.874
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.