Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL02502.1ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (547 aa)    
Predicted Functional Partners:
EFL02500.1
Nickel ABC transporter, permease subunit NikC.
 0.976
EFL02501.1
Nickel ABC transporter, permease subunit NikB.
 
 0.973
EFK98284.1
Peptide/opine/nickel uptake family ABC transporter.
 
0.933
EFL01345.1
Nickel ABC transporter, permease subunit NikC.
 0.930
EFL02944.1
Nickel ABC transporter, permease subunit NikC.
 0.925
EFL03303.1
Nickel ABC transporter, permease subunit NikC.
 0.913
EFL03685.1
Nickel ABC transporter, permease subunit NikC.
 0.913
EFL01346.1
Peptide ABC transporter permease.
 
 0.908
EFL02753.1
Nickel ABC transporter, permease subunit NikC.
 0.907
EFL03955.1
Nickel ABC transporter, permease subunit NikC.
 0.902
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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