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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02514.1Peptidase. (473 aa)    
Predicted Functional Partners:
EFL02513.1
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
       0.887
EFL02515.1
NUDIX hydrolase.
       0.809
EFL02454.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
  
 0.684
EFL02457.1
Succinyl-diaminopimelate desuccinylase.
      
 0.579
EFL02509.1
Integral membrane protein.
       0.556
EFL02510.1
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding.
       0.556
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.554
EFL02512.1
ATP dependent DNA helicase.
       0.535
EFL00672.1
Oxidoreductase; Unextendable partial coding region.
   
  0.505
EFL04050.1
Oxidoreductase.
   
  0.505
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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