Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL02514.1Peptidase. (473 aa)    
Predicted Functional Partners:
EFL02513.1
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
       0.880
EFL02515.1
NUDIX hydrolase.
       0.798
EFL02454.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
  
 0.688
EFK98067.1
Putative phosphosugar isomerase.
    
  0.600
EFK98240.1
Sugar isomerase.
    
  0.600
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
  0.600
glmS-2
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
  0.600
EFL02457.1
Succinyl-diaminopimelate desuccinylase.
      
 0.562
EFL00672.1
Oxidoreductase; Unextendable partial coding region.
   
  0.530
EFL02509.1
Integral membrane protein.
       0.530
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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