Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02676.1ABC transporter integral membrane subunit. (296 aa)    
Predicted Functional Partners:
EFL02677.1
Nodulation ABC transporter NodI.
 
     0.939
EFL02679.1
D-methionine ABC transporter, ATP-binding protein.
 
     0.856
EFK98798.1
Glycine betaine ABC transport system permease.
     
  0.831
EFL02678.1
ABC transporter integral membrane subunit.
 
    
0.809
EFL02680.1
Cellulose-binding protein.
 
   0.726
EFL01415.1
ABC transporter membrane protein.
 
 
  0.648
EFL02728.1
Integral membrane protein.
  
 
  0.625
EFL01927.1
ABC transporter membrane protein.
  
  0.592
EFL02449.1
ABC transporter integral membrane protein.
 
 
  0.590
EFK98603.1
ABC-2 type transporter.
  
 
  0.551
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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