Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02693.1Predicted protein. (411 aa)    
Predicted Functional Partners:
EFL02694.1
MarR-transcriptional regulator.
       0.855
EFL02695.1
Conserved hypothetical protein.
       0.742
EFL02999.1
Conserved hypothetical protein.
  
     0.565
EFK98373.1
MerR family transcriptional regulator.
       0.530
EFK98411.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.530
EFL01630.1
Conserved hypothetical protein.
  
     0.523
EFL00709.1
Conserved hypothetical protein.
  
     0.517
EFL00164.1
Conserved hypothetical protein.
  
     0.516
EFL01857.1
Conserved hypothetical protein.
  
     0.514
EFL01180.1
Regulator.
  
     0.494
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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