Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02709.1Two-component system sensor kinase. (564 aa)    
Predicted Functional Partners:
EFL02708.1
Two-component system response regulator.
 
 0.983
EFK98326.1
Two-component system response regulator.
 
 0.926
EFL02965.1
Two-component system sensor kinase.
    
 0.926
EFL02710.1
Sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.865
EFK98484.1
Transcriptional regulatory protein.
  
 0.669
EFL03902.1
Regulatory protein.
    
 0.541
EFL00387.1
Conserved hypothetical protein.
     
  0.436
EFL01127.1
Predicted protein.
   
 
 0.422
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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