Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02735.1Lipoprotein. (403 aa)    
Predicted Functional Partners:
EFL02773.1
Methionine synthase.
  
     0.680
EFL02734.1
Predicted protein.
       0.655
EFL01499.1
Conserved hypothetical protein.
  
     0.601
EFL01556.1
Serine proteinase.
  
     0.596
EFL01628.1
Conserved hypothetical protein.
  
     0.558
EFL02661.1
Secreted protein.
  
     0.546
EFL01202.1
Integral membrane protein.
  
     0.538
EFL01755.1
Conserved hypothetical protein.
  
     0.449
EFK99694.1
Conserved hypothetical protein.
  
     0.429
EFL00283.1
Chorismate mutase.
  
     0.424
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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