Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL02808.1Carboxyl transferase. (527 aa)    
Predicted Functional Partners:
EFL02810.1
Predicted protein.
   
 0.981
EFL00141.1
acetyl-CoA carboxylase, biotin carboxylase.
 
 0.974
EFL02379.1
acetyl-CoA carboxylase, biotin carboxylase.
 
 0.971
EFL04118.1
acetyl-CoA carboxylase, biotin carboxylase.
 
 0.970
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
 0.955
EFL03534.1
methylmalonyl-CoA mutase, coenzyme B12-dependent alpha subunit.
 
 
 0.910
EFL02804.1
Alpha-isopropylmalate/homocitrate synthase family transferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.841
EFL03763.1
Beta keto-acyl synthase; Truncated CDS.
  
 
 0.835
EFL03238.1
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.817
EFL03974.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.811
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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