Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL02822.1IclR family transcriptional regulator. (239 aa)    
Predicted Functional Partners:
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
    0.805
EFK99504.1
Conserved hypothetical protein.
  
     0.738
EFK98336.1
Transcriptional regulator.
  
     0.601
EFL01956.1
Oxidoreductase.
     
  0.570
EFK98395.1
Transcriptional regulator.
  
     0.561
EFL02824.1
Conserved hypothetical protein.
       0.530
EFL02825.1
DNA-binding protein HU 2; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.530
EFL01235.1
Integral membrane protein.
  
     0.519
EFL03345.1
Allophanate hydrolase subunit 2.
  
    0.499
EFL03074.1
Potassium transporter.
  
     0.482
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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