Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02833.1Transcriptional regulator. (77 aa)    
Predicted Functional Partners:
EFL02832.1
Conserved hypothetical protein.
       0.837
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.739
EFL02835.1
Phosphomethylpyrimidine kinase.
       0.649
EFK98726.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
  0.605
EFL01956.1
Oxidoreductase.
    
  0.554
EFL00852.1
Conserved hypothetical protein.
  
     0.533
EFL01552.1
Ion-transporting ATPase; Overlaps another CDS with the same product name.
  
     0.510
EFK99286.1
Cyclase/dehydrase.
  
     0.496
EFL01551.1
Ion-transporting ATPase; Overlaps another CDS with the same product name.
  
     0.463
pup
Conserved hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.
  
     0.449
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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