Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02970.1Conserved hypothetical protein. (291 aa)    
Predicted Functional Partners:
EFL02972.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.896
EFK99765.1
Rod shape-determining protein.
  
 
 0.858
EFK99545.1
Rod shape-determining protein.
  
 
 0.844
EFK99769.1
Rod shape-determining protein MreB.
  
 
 0.844
EFL04236.1
Cell shape determining protein.
  
 
 0.841
EFL02968.1
DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
       0.802
EFL02969.1
Predicted protein.
       0.773
EFL02973.1
Competence-damage inducible protein; Belongs to the CinA family.
  
    0.747
EFK99764.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 
 0.739
rimO
tRNA-I(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.728
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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