STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02984.1Chromosome replication initiation inhibitor protein; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
EFL02983.1
Membrane transporter.
 
   
 0.975
EFL02402.1
Transcriptional regulator.
   
    0.818
cobB
Sir2 family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.807
EFK99083.1
DNA-binding protein.
   
    0.804
EFK98405.1
Kinase/transcriptional regulator.
   
    0.792
EFL02092.1
Transcriptional regulator.
   
    0.742
EFL02094.1
Transcriptional regulator.
   
    0.742
EFK98910.1
GntR-family transcriptional regulator.
   
    0.656
EFK98618.1
Transcription regulator AsnC.
   
  
 0.655
EFL02694.1
MarR-transcriptional regulator.
   
    0.641
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.