STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL03024.1Conserved hypothetical protein. (196 aa)    
Predicted Functional Partners:
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.803
EFL03022.1
Hydrolase.
 
     0.769
EFL01127.1
Predicted protein.
  
     0.764
EFL01530.1
mutT.
  
     0.759
EFL02671.1
Conserved hypothetical protein.
  
     0.758
EFK98902.1
Conserved hypothetical protein.
  
     0.733
EFK99438.1
Integral membrane protein.
  
     0.732
EFL00116.1
Regulatory protein.
  
     0.713
EFK98951.1
Regulatory protein.
  
     0.709
EFL03021.1
Alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family.
 
     0.683
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.