STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL03774.1NAD-dependent aldehyde dehydrogenase. (453 aa)    
Predicted Functional Partners:
EFL03534.1
methylmalonyl-CoA mutase, coenzyme B12-dependent alpha subunit.
    
 0.925
EFL03307.1
Homogentisate 1,2-dioxygenase.
  
 0.900
EFL03773.1
Predicted protein.
 
     0.837
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
    
 0.801
EFL03775.1
Poly(aspartic acid) hydrolase.
 
     0.668
EFL01956.1
Oxidoreductase.
    
  0.643
EFL03772.1
Predicted protein.
 
    0.598
EFL02380.1
Acetyl/propionyl CoA carboxylase.
  
 
 0.590
EFL02808.1
Carboxyl transferase.
  
 
 0.590
EFL04117.1
Acetyl/propionyl CoA carboxylase.
  
 
 0.590
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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