STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL03913.1Predicted protein. (195 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.948
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 
 0.915
EFL01219.1
R3H domain-containing protein.
   
   0.795
EFL02869.1
Conserved hypothetical protein; Belongs to the UPF0109 family.
    
   0.783
EFK99113.1
Conserved hypothetical protein; Displays ATPase and GTPase activities.
    
 
 0.657
EFL01362.1
Conserved hypothetical protein.
    
 
 0.657
EFL01990.1
Conserved hypothetical protein.
    
 
 0.657
EFK99168.1
DEAD-box RNA helicase.
    
 
 0.557
EFL00068.1
ATP-dependent RNA helicase.
    
 
 0.557
EFL01438.1
ATP-dependent RNA helicase.
    
 
 0.557
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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