STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL29847.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
EFL29846.1
Serine/threonine protein kinase.
       0.821
EFL29849.1
ABC transporter ATP-binding protein.
       0.793
EFL29848.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
       0.773
EFL29850.1
Conserved hypothetical protein.
       0.719
EFL34178.1
Conserved hypothetical protein.
  
     0.665
EFL32714.1
Secreted protein.
  
     0.598
EFL31346.1
Integral membrane protein.
  
     0.577
EFL32494.1
Integral membrane protein.
  
     0.556
EFL33526.1
Predicted protein.
  
     0.524
EFL30291.1
O-succinylbenzoic acid-CoA ligase.
  
     0.522
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.