STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL29942.1Ectoine/hydroxyectoine ABC transporter, ATP-binding protein. (254 aa)    
Predicted Functional Partners:
EFL29943.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 0.999
EFL29947.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 0.997
EFL35290.1
Ectoine/hydroxyectoine ABC transporter, permease EhuD.
 
 0.982
EFL35291.1
Glutamate permease.
 
 0.982
EFL29944.1
ABC transporter substrate-binding protein.
 
 0.981
EFL29941.1
ABC amino acid transporter.
 
 0.977
EFL34797.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 0.976
EFL32364.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 
 0.973
EFL32365.1
Ectoine/hydroxyectoine ABC transporter, permease EhuD.
 
 0.973
EFL31369.1
Ectoine/hydroxyectoine ABC transporter, permease EhuD.
 0.958
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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