Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL29998.1 | EFL29999.1 | SSQG_00516 | SSQG_00517 | Aspartate ammonia-lyase. | L-asparaginase II; Overlaps another CDS with the same product name. | 0.758 |
EFL29998.1 | EFL30000.1 | SSQG_00516 | SSQG_00518 | Aspartate ammonia-lyase. | L-asparaginase II; Overlaps another CDS with the same product name. | 0.758 |
EFL29998.1 | EFL30001.1 | SSQG_00516 | SSQG_00519 | Aspartate ammonia-lyase. | GABA permease. | 0.562 |
EFL29998.1 | EFL30002.1 | SSQG_00516 | SSQG_00520 | Aspartate ammonia-lyase. | L-asparagine operon repressor. | 0.783 |
EFL29998.1 | EFL30005.1 | SSQG_00516 | SSQG_00523 | Aspartate ammonia-lyase. | Conserved hypothetical protein. | 0.631 |
EFL29998.1 | crcB | SSQG_00516 | SSQG_00522 | Aspartate ammonia-lyase. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.642 |
EFL29998.1 | crcB-2 | SSQG_00516 | SSQG_00524 | Aspartate ammonia-lyase. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.635 |
EFL29998.1 | glsA | SSQG_00516 | SSQG_00515 | Aspartate ammonia-lyase. | Glutaminase; Belongs to the glutaminase family. | 0.825 |
EFL29998.1 | uppP | SSQG_00516 | SSQG_00521 | Aspartate ammonia-lyase. | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.452 |
EFL29999.1 | EFL29998.1 | SSQG_00517 | SSQG_00516 | L-asparaginase II; Overlaps another CDS with the same product name. | Aspartate ammonia-lyase. | 0.758 |
EFL29999.1 | EFL30000.1 | SSQG_00517 | SSQG_00518 | L-asparaginase II; Overlaps another CDS with the same product name. | L-asparaginase II; Overlaps another CDS with the same product name. | 0.963 |
EFL29999.1 | EFL30001.1 | SSQG_00517 | SSQG_00519 | L-asparaginase II; Overlaps another CDS with the same product name. | GABA permease. | 0.790 |
EFL29999.1 | EFL30002.1 | SSQG_00517 | SSQG_00520 | L-asparaginase II; Overlaps another CDS with the same product name. | L-asparagine operon repressor. | 0.821 |
EFL29999.1 | EFL30005.1 | SSQG_00517 | SSQG_00523 | L-asparaginase II; Overlaps another CDS with the same product name. | Conserved hypothetical protein. | 0.492 |
EFL29999.1 | crcB | SSQG_00517 | SSQG_00522 | L-asparaginase II; Overlaps another CDS with the same product name. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.492 |
EFL29999.1 | crcB-2 | SSQG_00517 | SSQG_00524 | L-asparaginase II; Overlaps another CDS with the same product name. | Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.492 |
EFL29999.1 | glsA | SSQG_00517 | SSQG_00515 | L-asparaginase II; Overlaps another CDS with the same product name. | Glutaminase; Belongs to the glutaminase family. | 0.547 |
EFL29999.1 | uppP | SSQG_00517 | SSQG_00521 | L-asparaginase II; Overlaps another CDS with the same product name. | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.567 |
EFL30000.1 | EFL29998.1 | SSQG_00518 | SSQG_00516 | L-asparaginase II; Overlaps another CDS with the same product name. | Aspartate ammonia-lyase. | 0.758 |
EFL30000.1 | EFL29999.1 | SSQG_00518 | SSQG_00517 | L-asparaginase II; Overlaps another CDS with the same product name. | L-asparaginase II; Overlaps another CDS with the same product name. | 0.963 |
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