STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30033.1Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (479 aa)    
Predicted Functional Partners:
EFL30035.1
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.918
EFL30034.1
FAD binding oxidoreductase.
  
 
 0.874
EFL30478.1
Phenyloxazoline synthase mbtB.
  
 0.862
EFL30423.1
Polyketide synthase subunit.
  
 0.847
EFL34482.1
Aldehyde dehydrogenase.
    
0.838
EFL30437.1
Polyketide synthase type I.
  
 0.829
EFL33833.1
Polyketide synthase I protein; Truncated CDS.
  
 0.829
EFL33834.1
Polyketide synthase type I.
  
 0.829
EFL31450.1
Glutamate synthase large subunit.
  
 
 0.828
EFL35209.1
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.819
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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