STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30047.1Nickel ABC transporter, permease subunit NikB. (317 aa)    
Predicted Functional Partners:
EFL30048.1
Nickel ABC transporter, permease subunit NikC.
 
 0.990
EFL30046.1
ABC peptide transporter binding protein.
  0.987
EFL30049.1
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.
 
 
 0.986
EFL34695.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.941
EFL35050.1
Nickel import ATP-binding protein NikE.
 
 0.928
EFL34631.1
Nickel ABC transporter, permease subunit NikC.
 
 0.927
EFL34693.1
Nickel ABC transporter, permease subunit NikC.
 
 0.927
EFL35003.1
Nickel ABC transporter, permease subunit NikC.
 
 0.927
EFL35243.1
Nickel ABC transporter, permease subunit NikC.
 
 0.927
EFL34629.1
Transport system protein.
 
 
 0.917
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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