STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30179.1Extracellular solute-binding protein. (325 aa)    
Predicted Functional Partners:
EFL30178.1
Binding-protein-dependent transport system inner membrane component.
 
   0.962
EFL30177.1
Transport system membrane protein.
 
  0.961
EFL30896.1
Transport system membrane protein; Overlaps another CDS with the same product name.
 
   0.838
EFL30176.1
Predicted protein.
       0.821
EFL31080.1
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.
  
 0.804
EFL32151.1
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.
  
 0.804
EFL32153.1
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.
  
 0.804
EFL34011.1
ABC sugar transporter.
  
 0.803
EFL30727.1
Sugar ABC transporter permease.
  
 0.793
EFL35585.1
Transmembrane protein.
  
 0.793
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.