STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30267.1Predicted protein. (454 aa)    
Predicted Functional Partners:
EFL32974.1
Glycoside hydrolase.
    
  0.831
EFL29604.1
Alkaline serine protease; Belongs to the peptidase S8 family.
  
 0.816
EFL35666.1
Peptidase S8 and S53.
  
 0.816
EFL36788.1
Endoglycosylceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.666
EFL30070.1
Unsaturated glucuronyl hydrolase; Unextendable partial coding region.
    
   0.661
EFL34527.1
Spermatogenesis-associated protein 20.
    
   0.661
EFL29995.1
Conserved hypothetical protein.
    
   0.658
EFL30332.1
Secreted glycosyl hydrolase.
    
 0.648
EFL36043.1
Glycosyl hydrolase.
    
 0.648
EFL36191.1
Transcriptional regulator.
    
 0.648
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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