STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30347.1Predicted protein. (132 aa)    
Predicted Functional Partners:
EFL30346.1
Conserved hypothetical protein.
 
    
0.742
EFL31965.1
Predicted protein.
  
     0.685
EFL33839.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.604
EFL30424.1
ISXo8 transposase; Truncated CDS.
  
     0.584
EFL30348.1
crotonyl-CoA reductase.
       0.565
EFL37077.1
IS630 family transposase.
  
     0.557
EFL34002.1
Conserved hypothetical protein.
  
     0.553
EFL30349.1
3-oxoacyl-[acyl-carrier-protein] synthase III.
       0.547
EFL30350.1
3-hydroxybutyryl-CoA dehydrogenase.
       0.545
EFL30368.1
Putrescine aminotransferase.
  
     0.535
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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