STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30392.1Conserved hypothetical protein. (145 aa)    
Predicted Functional Partners:
EFL30391.1
Conserved hypothetical protein.
 
     0.957
EFL30390.1
Asparagine synthetase.
 
     0.899
EFL30393.1
Lipid A export permease/ATP-binding protein MsbA.
 
     0.861
EFL32023.1
Asparagine synthetase.
 
     0.793
EFL32024.1
Predicted protein.
 
     0.789
EFL31880.1
Regulatory protein.
  
     0.576
EFL36857.1
Regulatory protein.
  
     0.509
EFL31778.1
Predicted protein.
  
     0.493
EFL32471.1
XRE family transcriptional regulator.
  
     0.464
EFL33348.1
Regulator.
  
     0.442
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.