STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30438.1Predicted protein. (241 aa)    
Predicted Functional Partners:
EFL29662.1
Aminotransferase.
 
 0.999
EFL29663.1
Beta-ketoacyl synthase.
 
 0.999
EFL30423.1
Polyketide synthase subunit.
 
 0.999
EFL30475.1
Polyketide synthase.
 
 0.999
EFL30476.1
Polyketide synthase.
 
 0.999
EFL30478.1
Phenyloxazoline synthase mbtB.
  
 0.999
EFL30528.1
Phosphinothricin tripeptide synthetase III.
 
 0.999
EFL31714.1
Predicted protein.
 
 0.999
EFL31838.1
Malonate decarboxylase, epsilon subunit.
  
 0.999
EFL30362.1
Polyketide synthase pks7.
 
 0.998
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.