STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30504.1Transcriptional regulator. (192 aa)    
Predicted Functional Partners:
EFL30503.1
formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
       0.634
EFL30236.1
Conserved hypothetical protein.
  
 
 0.628
EFL30672.1
Transcriptional regulatory protein.
 
0.615
EFL35936.1
SIR2 family transcriptional regulator.
  
 
  0.573
EFL30505.1
Major facilitator transporter.
       0.568
EFL35989.1
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.568
EFL30980.1
Regulatory protein.
  
    0.546
EFL35890.1
3-oxoadipate enol-lactone hydrolase.
    
 0.531
EFL36177.1
3-oxoadipate enol-lactonase.
    
 0.531
EFL29662.1
Aminotransferase.
     
 0.504
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.