STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30630.1Two-component system sensor kinase; Overlaps another CDS with the same product name. (210 aa)    
Predicted Functional Partners:
EFL35264.1
Two-component system sensor kinase.
  
 0.926
EFL30631.1
Two-component system response regulator.
 
  0.875
EFL29639.1
Two-component system sensor kinase.
  
 0.798
EFL32055.1
Two-component system sensor kinase.
  
 0.798
EFL30629.1
Two-component system sensor kinase; Overlaps another CDS with the same product name.
       0.773
EFL30627.1
ABC transporter integral membrane protein.
 
    0.770
EFL34347.1
Integral membrane protein.
 
  
 0.747
EFL35878.1
Two-component system sensor kinase; Overlaps another CDS with the same product name.
  
     0.672
EFL30628.1
Nodulation ABC transporter NodI.
 
    0.643
EFL30632.1
Transcriptional regulator.
       0.597
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.