STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL30638.1Alkaline phosphatase. (547 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I.
 
  
 0.913
EFL33885.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.892
EFL29705.1
Alkaline phosphatase.
  
  
 
0.817
EFL32092.1
Phosphodiesterase/alkaline phosphatase D.
  
  
 
0.817
EFL31490.1
Phospholipase D.
  
  
 
0.816
EFL30639.1
Conserved hypothetical protein.
       0.757
EFL30636.1
Hydrolase.
       0.730
EFL30637.1
GntR family transcriptional regulator.
       0.617
EFL30633.1
GntR family transcriptional regulator.
       0.613
EFL30642.1
Conserved hypothetical protein.
       0.541
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.