Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL29902.1 | EFL36440.1 | SSQG_00420 | SSQG_06958 | Serine/threonine protein kinase; Unextendable partial coding region. | NB-ARC domain-containing protein. | 0.746 |
EFL29902.1 | alaS | SSQG_00420 | SSQG_01372 | Serine/threonine protein kinase; Unextendable partial coding region. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.861 |
EFL30853.1 | EFL30855.1 | SSQG_01371 | SSQG_01373 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Secreted protein. | 0.860 |
EFL30853.1 | EFL30856.1 | SSQG_01371 | SSQG_01374 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Secreted protein. | 0.860 |
EFL30853.1 | alaS | SSQG_01371 | SSQG_01372 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.978 |
EFL30855.1 | EFL30853.1 | SSQG_01373 | SSQG_01371 | Secreted protein. | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.860 |
EFL30855.1 | EFL30856.1 | SSQG_01373 | SSQG_01374 | Secreted protein. | Secreted protein. | 0.914 |
EFL30855.1 | alaS | SSQG_01373 | SSQG_01372 | Secreted protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.876 |
EFL30856.1 | EFL30853.1 | SSQG_01374 | SSQG_01371 | Secreted protein. | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.860 |
EFL30856.1 | EFL30855.1 | SSQG_01374 | SSQG_01373 | Secreted protein. | Secreted protein. | 0.914 |
EFL30856.1 | alaS | SSQG_01374 | SSQG_01372 | Secreted protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.876 |
EFL30957.1 | alaS | SSQG_01475 | SSQG_01372 | phenylalanyl-tRNA synthetase, beta subunit; Truncated CDS; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.962 |
EFL30957.1 | glyS | SSQG_01475 | SSQG_03828 | phenylalanyl-tRNA synthetase, beta subunit; Truncated CDS; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | glycyl-tRNA synthetase, beta subunit. | 0.976 |
EFL30957.1 | valS | SSQG_01475 | SSQG_02635 | phenylalanyl-tRNA synthetase, beta subunit; Truncated CDS; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.886 |
EFL35950.1 | EFL36440.1 | SSQG_06468 | SSQG_06958 | Adenylosuccinate lyase. | NB-ARC domain-containing protein. | 0.796 |
EFL35950.1 | alaS | SSQG_06468 | SSQG_01372 | Adenylosuccinate lyase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.870 |
EFL36353.1 | EFL36440.1 | SSQG_06872 | SSQG_06958 | WD-40 repeat-containing protein; Truncated CDS. | NB-ARC domain-containing protein. | 0.821 |
EFL36353.1 | alaS | SSQG_06872 | SSQG_01372 | WD-40 repeat-containing protein; Truncated CDS. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.860 |
EFL36440.1 | EFL29902.1 | SSQG_06958 | SSQG_00420 | NB-ARC domain-containing protein. | Serine/threonine protein kinase; Unextendable partial coding region. | 0.746 |
EFL36440.1 | EFL35950.1 | SSQG_06958 | SSQG_06468 | NB-ARC domain-containing protein. | Adenylosuccinate lyase. | 0.796 |
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