Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL31168.1 | EFL31170.1 | SSQG_01686 | SSQG_01688 | Hydrolase. | Tetratricopeptide TPR_4. | 0.935 |
EFL31170.1 | EFL31168.1 | SSQG_01688 | SSQG_01686 | Tetratricopeptide TPR_4. | Hydrolase. | 0.935 |
EFL31170.1 | EFL32228.1 | SSQG_01688 | SSQG_02746 | Tetratricopeptide TPR_4. | alanyl-tRNA synthetase. | 0.849 |
EFL31170.1 | EFL35264.1 | SSQG_01688 | SSQG_05783 | Tetratricopeptide TPR_4. | Two-component system sensor kinase. | 0.925 |
EFL31170.1 | EFL36440.1 | SSQG_01688 | SSQG_06958 | Tetratricopeptide TPR_4. | NB-ARC domain-containing protein. | 0.984 |
EFL31170.1 | alaS | SSQG_01688 | SSQG_01372 | Tetratricopeptide TPR_4. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.849 |
EFL31170.1 | dnaK | SSQG_01688 | SSQG_04185 | Tetratricopeptide TPR_4. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.815 |
EFL31170.1 | dnaK-2 | SSQG_01688 | SSQG_06526 | Tetratricopeptide TPR_4. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.815 |
EFL31170.1 | rpoA | SSQG_01688 | SSQG_04798 | Tetratricopeptide TPR_4. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.849 |
EFL31170.1 | rpoB | SSQG_01688 | SSQG_04744 | Tetratricopeptide TPR_4. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.833 |
EFL31170.1 | rpoZ | SSQG_01688 | SSQG_01348 | Tetratricopeptide TPR_4. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.892 |
EFL32228.1 | EFL31170.1 | SSQG_02746 | SSQG_01688 | alanyl-tRNA synthetase. | Tetratricopeptide TPR_4. | 0.849 |
EFL32228.1 | EFL36440.1 | SSQG_02746 | SSQG_06958 | alanyl-tRNA synthetase. | NB-ARC domain-containing protein. | 0.973 |
EFL32228.1 | dnaK | SSQG_02746 | SSQG_04185 | alanyl-tRNA synthetase. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.546 |
EFL32228.1 | dnaK-2 | SSQG_02746 | SSQG_06526 | alanyl-tRNA synthetase. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.586 |
EFL32228.1 | rpoB | SSQG_02746 | SSQG_04744 | alanyl-tRNA synthetase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.548 |
EFL35264.1 | EFL31170.1 | SSQG_05783 | SSQG_01688 | Two-component system sensor kinase. | Tetratricopeptide TPR_4. | 0.925 |
EFL35264.1 | EFL36440.1 | SSQG_05783 | SSQG_06958 | Two-component system sensor kinase. | NB-ARC domain-containing protein. | 0.550 |
EFL35264.1 | dnaK | SSQG_05783 | SSQG_04185 | Two-component system sensor kinase. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.668 |
EFL35264.1 | dnaK-2 | SSQG_05783 | SSQG_06526 | Two-component system sensor kinase. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.668 |
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