STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL31214.1Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (515 aa)    
Predicted Functional Partners:
EFL35264.1
Two-component system sensor kinase.
    
 0.845
EFL31215.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.823
EFL31216.1
Predicted protein.
       0.821
EFL34760.1
Integral membrane protein.
 
     0.816
EFL31213.1
Carbon starvation protein CstA.
  
    0.807
EFL31217.1
Glycosyl hydrolase.
 
     0.726
EFL31218.1
3-oxoacyl-[acyl-carrier-protein] reductase.
       0.719
EFL35055.1
Proline dehydrogenase.
  
  
 0.719
EFL36165.1
Phospholipase C, phosphocholine-specific.
  
     0.521
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.513
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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