STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL31289.1DeoR family transcriptional regulator. (258 aa)    
Predicted Functional Partners:
EFL32767.1
Fructose-specific permease.
 
  
 0.877
EFL32556.1
PTS system, fructose-specific IIABC component.
 
  
 0.860
EFL32768.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.848
EFL33031.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.792
EFL35353.1
acyl-CoA synthetase.
    
   0.691
EFL31290.1
Substrate binding protein.
       0.564
EFL31291.1
Sugar ABC transporter permease.
       0.563
EFL31292.1
Integral membrane sugar transporter.
       0.558
EFL31293.1
L-threonine 3-dehydrogenase.
       0.554
EFL31294.1
Conserved hypothetical protein.
       0.495
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.