STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL31388.1Conserved hypothetical protein. (252 aa)    
Predicted Functional Partners:
EFL31387.1
Conserved hypothetical protein.
 
     0.824
EFL31389.1
Integral membrane protein.
       0.721
EFL31390.1
Glutamate synthase (NADPH), homotetrameric.
       0.662
EFL35441.1
Conserved hypothetical protein.
  
     0.604
EFL33392.1
Secreted protein.
  
     0.601
EFL31785.1
Conserved hypothetical protein.
  
     0.596
EFL36904.1
Conserved hypothetical protein.
  
     0.578
EFL36469.1
Spore-associated protein.
  
     0.564
EFL32716.1
Predicted protein.
  
     0.555
EFL35470.1
Predicted protein.
  
     0.551
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.