STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL31591.1Two component system response regulator. (228 aa)    
Predicted Functional Partners:
EFL35264.1
Two-component system sensor kinase.
  
 0.982
EFL31592.1
Two-component system sensor kinase.
 0.972
EFL29639.1
Two-component system sensor kinase.
   
 0.931
EFL32055.1
Two-component system sensor kinase.
   
 0.931
EFL33576.1
Two-component sensor kinase.
 0.883
EFL33896.1
Two-component system sensor kinase.
 
 0.880
EFL32951.1
Conserved hypothetical protein.
  
 0.877
EFL32011.1
Two-component sensor kinase.
  
 0.845
EFL30241.1
Two component system sensor kinase; Truncated CDS.
 
  0.841
EFL33580.1
Two-component system sensor kinase.
 
  0.838
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.