STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL31815.1ATP/GTP-binding protein. (388 aa)    
Predicted Functional Partners:
EFL31814.1
Conserved hypothetical protein; Truncated CDS.
 
   
 0.957
EFL31813.1
Hydrolase.
 
     0.955
EFL31816.1
Tellurium resistance protein.
 
     0.939
EFL34599.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.862
EFL31375.1
Export associated protein.
 
     0.819
EFL34186.1
2-oxoglutarate ferredoxin oxidoreductase.
    
 0.815
EFL31818.1
Tellurium resistance protein terA.
 
     0.796
EFL31295.1
Transport associated protein; Truncated CDS; unextendable partial coding region.
 
     0.793
EFL31376.1
Export protein.
 
     0.792
EFL30145.1
Tellurium resistance protein.
 
     0.791
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.