STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL32135.1Biotin synthase. (221 aa)    
Predicted Functional Partners:
EFL32729.1
Cell division ATP-binding protein FtsE; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
 0.987
EFL36633.1
Cell division ATP-binding protein FtsE; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
 0.987
EFL32728.1
Cobalt ABC transporter, permease CbiQ.
  
 0.977
EFL36634.1
Cobalt ABC transporter, permease CbiQ; Unextendable partial coding region.
  
 0.977
EFL31774.1
Integral membrane protein.
 
 
 0.974
EFL31240.1
Cobyrinic acid a,c-diamide synthase.
  
  
 0.689
EFL31773.1
ABC transporter ATP-binding subunit.
 
  
  0.688
EFL31772.1
ABC transporter.
    
  0.647
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.578
EFL34499.1
biotin-[acetyl-CoA-carboxylase] ligase.
 
   
 0.564
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.