STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL32337.1Beta-galactosidase. (478 aa)    
Predicted Functional Partners:
EFL30749.1
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
 0.820
EFL32974.1
Glycoside hydrolase.
    
 0.806
EFL29746.1
Glycosyl hydrolase family 32 protein; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.783
EFL32187.1
Sugar hydrolase.
  
 
 0.781
EFL36129.1
6-phospho-beta-glucosidase.
  
 
 0.781
EFL31845.1
Beta-glucosidase.
    
 0.762
EFL34310.1
Xylan 1,4-beta-xylosidase.
    
 0.762
EFL35214.1
Sugar hydrolase.
    
 0.762
EFL32334.1
Cellobiose ABC transporter solute-binding protein.
 
   
 0.758
EFL36273.1
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
   
 
 0.752
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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