STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL32565.1Secreted protein. (454 aa)    
Predicted Functional Partners:
EFL32566.1
Integral membrane regulatory protein.
 
     0.932
EFL31229.1
Conserved hypothetical protein.
  
     0.752
lpqB
Lipoprotein lpqB.
  
     0.749
EFL33923.1
Alanine-rich protein; Truncated CDS.
  
     0.745
EFL31303.1
Conserved hypothetical protein.
  
     0.737
EFL30901.1
Conserved hypothetical protein.
  
     0.734
EFL32078.1
Membrane protein.
  
     0.734
EFL33389.1
Conserved hypothetical protein.
 
     0.732
EFL32665.1
Lipoprotein.
  
     0.731
EFL31688.1
Conserved hypothetical protein.
  
     0.727
Your Current Organism:
Streptomyces viridochromogenes
NCBI taxonomy Id: 591159
Other names: S. viridochromogenes DSM 40736, Streptomyces viridochromogenes DSM 40736, Streptomyces viridochromogenes str. DSM 40736, Streptomyces viridochromogenes strain DSM 40736
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.